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A ferroptosis-related gene signature for graft loss prediction following renal allograft

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机构: [1]Organ Transplantation Center, The First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, P. R. China
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关键词: Ferroptosis renal allograft prognosis gene signature nomogram

摘要:
Allogeneic kidney transplantation (renal allograft) is the most effective treatment for advanced kidney disease. Previous studies have indicated that ferroptosis participates in the progression of acute kidney injury and renal transplant failure. However, few studies have evaluated the prognostic value of ferroptosis on renal transplantation outcomes. In this study, a total of 32 differentially expressed ferroptosis-related genes (DFGs) were identified, which were mainly enriched in infection-related pathways. Next, a ferroptosis-related gene signature, including GA-binding protein transcription factor subunit beta 1 (GABPB1), cyclin-dependent kinase inhibitor 1A (CDKN1A), Toll-like receptor 4 (TLR4), C-X-C motif chemokine ligand 2 (CXCL2), caveolin 1 (CAV1), and ribonucleotide reductase subunit M2 (RRM2), was constructed to predict graft loss following renal allograft. Moreover, receiver operating characteristic (ROC) curves (area under the ROC curve [AUC] > 0.8) demonstrated the accuracy of the gene signature and univariate Cox analysis suggested that the gene signature could play an independent role in graft loss (p < 0.05). Furthermore, the nomogram and calibration plots also indicated the good prognostic capability of the gene signature. Finally, immune-related and cytokine signaling pathways were mostly enriched in renal allograft patients with poor outcomes. Considered together, a ferroptosis-related gene signature and nomogram based on DFGs were created to predict the 1-, 2- and 3- year graft loss probability of renal allograft patients.The gene signature could serve as a valuable biomarker for predicting graft loss, contributing to improving the outcome of allogeneic kidney transplantation.

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出版当年[2022]版:
大类 | 2 区 生物学
小类 | 2 区 生物工程与应用微生物
最新[2023]版:
大类 | 4 区 生物学
小类 | 4 区 生物工程与应用微生物
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出版当年[2021]版:
Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
最新[2023]版:
Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY

影响因子: 最新[2023版] 最新五年平均 出版当年[2021版] 出版当年五年平均 出版前一年[2020版] 出版后一年[2022版]

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第一作者机构: [1]Organ Transplantation Center, The First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, P. R. China
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通讯机构: [1]Organ Transplantation Center, The First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, P. R. China [*1]Organ Transplantation Center, The First Affiliated Hospital of Kunming Medical University, NO. 295, Xichang Road, Kunming, Yunnan 650032, P. R. China
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