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Identification and experimental validation of PYCARD as a crucial PANoptosis-related gene for immune response and inflammation in COPD

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机构: [1]Yunnan Key Laboratory of Pharmacology for Natural Products, Kunming Medical University, Kunming, China [2]State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China [3]Department of Emergency, The First Afliated Hospital of Kunming Medical University, Kunming, China [4]Department of Respiratory and Critical Care Medicine, First Afliated Hospital of Kunming Medical University, Kunming, China [5]Department of Pulmonary and Critical Care Medicine, First Afliated Hospital, Kunming Medical University, Kunming, China [6]Institute for Developmental and Regenerative Cardiovascular Medicine, Xinhua Hospital Afliated to Shanghai Jiaotong University School of Medicine, Shanghai, China
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关键词: COPD PANoptosis PYCARD Immune infltration Infammation

摘要:
Chronic inflammatory and immune responses play key roles in the development and progression of chronic obstructive pulmonary disease (COPD). PANoptosis, as a unique inflammatory cell death modality, is involved in the pathogenesis of many inflammatory diseases. We aim to identify critical PANoptosis-related biomarkers and explore their potential effects on respiratory tract diseases and immune infiltration landscapes in COPD. Total microarray data consisting of peripheral blood and lung tissue datasets associated with COPD were obtained from the GEO database. PANoptosis-associated genes in COPD were identified by intersecting differentially expressed genes (DEGs) with genes involved in pyroptosis, apoptosis, and necroptosis after normalizing and removing the batch effect. Furthermore, GO, KEGG, PPI network, WGCNA, LASSO-COX, and ROC curves analysis were conducted to screen and verify hub genes, and the correlation between PYCARD and infiltrated immune cells was analyzed. The effect of PYCARD on respiratory tract diseases and the potential small-molecule agents for the treatment of COPD were identified. PYCARD expression was verified in the lung tissue of CS/LPS-induced COPD mice. PYCARD was a critical PANoptosis-related gene in all COPD patients. PYCARD was positively related to NOD-like receptor signaling pathway and promoted immune cell infiltration. Moreover, PYCARD was significantly activated in COPD mice mainly by targeting PANoptosis. PANoptosis-related gene PYCARD is a potential biomarker for COPD diagnosis and treatment.© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

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大类 | 2 区 生物学
小类 | 2 区 生化与分子生物学 3 区 细胞生物学
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Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Q1 CELL BIOLOGY

影响因子: 最新[2023版] 最新五年平均 出版当年[2024版] 出版当年五年平均 出版前一年[2023版]

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第一作者机构: [1]Yunnan Key Laboratory of Pharmacology for Natural Products, Kunming Medical University, Kunming, China
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