机构:[1]Department of Clinical Laboratory, the First Affiliated Hospital of Kunming Medical University昆明医科大学附属第一医院医学检验科医技科室[2]Yunnan Institute of Experimental Diagnosis, Kunming, People’s Republic of China
The morbidity and mortality of lung cancer in Xuanwei, China, are the highest in the world. This study attempts to identify differentially expressed genes (DEGs) related to lung adenocarcinoma in Xuanwei. The expression profiles of eight paired lung adenocarcinoma tissues and corresponding nontumor tissues were acquired by microarrays. Functional annotations of DEGs were carried out by bioinformatics analysis. The results of the microarrays were further verified by real-time quantitative PCR (RTq-PCR). A total of 5290 genes were classified as DEGs in lung adenocarcinoma in Xuanwei; 3325 genes were upregulated and 1965 genes were downregulated, whereas the expression of the other 11970 genes did not change. These DEGs are involved in a wide range of cancer-related processes, which include cell division, cell adhesion, cell proliferation, and DNA replication, and in many pathways such as the p53 signaling pathway, the MAPK pathway, the Jak-STAT signaling pathway, the hedgehog signaling pathway, and the non-small-cell lung cancer pathway. The tendency of changes in the expression of 12 selected DEGs (five downregulated genes, PIK3R1, RARB, HGF, MAPK11, and SESN1, and seven upregulated genes, PAK1, E2F1, CCNE1, EGF, CDC25A, PTTG1, and UHRF1) in RTq-PCR was consistent with the expression profiling data. Expression of PAK1 was significantly increased in the low differentiation group (P=0.031), whereas expression of HGF was significantly decreased in the low differentiation group (P=0.045). RARB and MAPK11 were significantly increased in the nonsmoker group (P=0.033 and 0.040, respectively). A large number of DEGs in lung adenocarcinoma in Xuanwei have been detected, which may enable us to understand the pathogenesis and lay an important foundation for the prevention and treatment of lung adenocarcinoma in Xuanwei.
基金:
National Natural Science Foundation of ChinaNational Natural Science Foundation of China [81160292, 81460325]; Key Project of Science and Technology Department of Yunnan Province-Kunming Medical University Union Fund [2014FA014]
第一作者机构:[1]Department of Clinical Laboratory, the First Affiliated Hospital of Kunming Medical University[2]Yunnan Institute of Experimental Diagnosis, Kunming, People’s Republic of China
共同第一作者:
通讯作者:
通讯机构:[*1]Department of Clinical Laboratory, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan Province 650032, People’s Republic of China
推荐引用方式(GB/T 7714):
Wu Huifei,Meng Shuangshuang,Xu Qiuyue,et al.Gene expression profiling of lung adenocarcinoma in Xuanwei, China[J].EUROPEAN JOURNAL OF CANCER PREVENTION.2016,25(6):508-517.doi:10.1097/CEJ.0000000000000214.
APA:
Wu, Huifei,Meng, Shuangshuang,Xu, Qiuyue,Wang, Xiao,Wang, Juan...&Zhang, Yanliang.(2016).Gene expression profiling of lung adenocarcinoma in Xuanwei, China.EUROPEAN JOURNAL OF CANCER PREVENTION,25,(6)
MLA:
Wu, Huifei,et al."Gene expression profiling of lung adenocarcinoma in Xuanwei, China".EUROPEAN JOURNAL OF CANCER PREVENTION 25..6(2016):508-517